CIBC:Meshing Results
From NCRR Biomedical Software Development, Engineering, and Dissemination Wiki
Contents |
Collaborator Meshes
Simon Warfield
Images
- ./warfield/15y-brain/crj/15y-brain-high-res.png
- ./warfield/15y-brain/crj/surf-edges-sf1.png
- ./warfield/fixed-reduced-surfs-edges.png
- ./warfield/missing-skin.png
- ./warfield/s1.png
- ./warfield/seg-problem.png
- ./warfield/skin-orig-ma.png
- ./warfield/skin-ray-ma.png
- ./warfield/tet-edges-fixed-reduced.png
- ./warfield/tet-edges.png
- ./warfield/tets-labeled-clipped-fixed-reduced.png
- ./warfield/tets-labeled-clipped.png
15y data set
high resolution
Located in : ./warfield/15y-brain/crj/mesh2/junctions/points-sf1.0/
TriSurf
Number of Tri elements checked = 3510322
Euler characteristics for this mesh indicate 405 holes in this block of elements.
(Assumes a single contiguous block of elements.)
Tris: 3510322 Edges: 5242493 Nodes: 1732983
Area: Low = 8.51836e-07, Average = 0.129621, High = 99.1556
Minimum_Angle: Low = 0.00745434, Average = 48.8617, High = 59.9862
Maximum_Angle: Low = 60.0098, Average = 74.6795, High = 176.854
Condition: Low = 1, Average = 1.10108, High = 4437.65
Scaled_Jacobian: Low = 0.00015023, Average = 0.864754, High = 0.999861
Shape: Low = 0.000225345, Average = 0.94057, High = 1
Shape_Size: Low = 0, Average = 0, High = 0
Distortion: Low = 1, Average = 1, High = 1
Inv Radius Ratio: Low = 0.000259467, Average = 0.929397, High = 1
TetVol
15y-brain-labels-high-res.tvc.fld
Number of Tet elements checked = 15561759
Euler characteristics for this mesh indicate 2 holes in this block of elements.
(Assumes a single contiguous block of elements.)
Element counts: Tets: 15561759 Faces: 31326612 Edges: 18488223 Nodes: 2723368
Aspect Ratio: Low = 1.00005, Average = 2.80414, High = 1.28932e+06
Aspect Ratio (gamma): Low = 1.00072, Average = 10.5797, High = 1.13043e+07
Volume: Low = 1.31597e-15, Average = 0.117654, High = 28.8929
Condition: Low = 1.00004, Average = 1.91317, High = 28009.3
Jacobian: Low = 7.89581e-15, Average = 0.705924, High = 173.358
Scaled_Jacobian: Low = 3.12968e-08, Average = 0.357157, High = 0.996228
Shape: Low = 1.98623e-05, Average = 0.637944, High = 0.999959
Shape_Size: Low = 0, Average = 0, High = 0
Distortion: Low = 1, Average = 1, High = 1
Low Resolution
./warfield/15y-brain/crj/mesh2/junctions/points-sf3.0/
TetVol
15y-brain-labels.tvc.fld
Number of Tet elements checked = 1765216
Euler characteristics for this mesh indicate 2 holes in this block of elements.
(Assumes a single contiguous block of elements.)
Element counts: Tets: 1765216 Faces: 3556676 Edges: 2087737 Nodes: 296275
Aspect Ratio: Low = 1.00075, Average = 2.38652, High = 97188.1
Aspect Ratio (gamma): Low = 1.00105, Average = 25.3265, High = 8.96232e+06
Volume: Low = 2.44047e-11, Average = 1.03395, High = 46.7089
Condition: Low = 1.0007, Average = 1.93902, High = 12236.2
Jacobian: Low = 1.46428e-10, Average = 6.20368, High = 280.254
Scaled_Jacobian: Low = 3.94489e-08, Average = 0.400344, High = 0.989018
Shape: Low = 2.31768e-05, Average = 0.662847, High = 0.999299
Shape_Size: Low = 0, Average = 0, High = 0
Distortion: Low = 1, Average = 1, High = 1
Radius Ratio: Low = 1.02893e-05, Average = 0.6094, High = 0.999252
Tri-Surfs
Number of Tri elements checked = 450945
Euler characteristics for this mesh indicate -106 holes in this block of elements.
(Assumes a single contiguous block of elements.)
Tris: 450945 Edges: 668999 Nodes: 217844
Area: Low = 5.40833e-07, Average = 0.993502, High = 67.7948
Minimum_Angle: Low = 0.0052897, Average = 44.891, High = 59.9605
Maximum_Angle: Low = 60.0215, Average = 78.6624, High = 168.551
Condition: Low = 1, Average = 1.18465, High = 6253.61
Scaled_Jacobian: Low = 0.000106605, Average = 0.807944, High = 0.999602
Shape: Low = 0.000159908, Average = 0.904373, High = 1
Shape_Size: Low = 0, Average = 0, High = 0
Distortion: Low = 1, Average = 1, High = 1
Inv Radius Ratio: Low = 0.000184293, Average = 0.887842, High = 1
- surf.ts.fld (input to TetGen)
- air.ts.fld
- fluid.ts.fld
- grey.ts.fld
- lesion.ts.fld
- white.ts.fld
Head with Skull
Located in : ./warfield/
TriSurf
Number of Tri elements checked = 265989
Euler characteristics for this mesh indicate 0 holes in this block of elements.
(Assumes a single contiguous block of elements.)
Tris: 265989 Edges: 397191 Nodes: 131203
Area: Low = 0.000792772, Average = 2.7208, High = 45.2868
Minimum_Angle: Low = 4.0295, Average = 45.0137, High = 59.9607
Maximum_Angle: Low = 60.0507, Average = 78.6354, High = 165.542
Condition: Low = 1, Average = 1.11618, High = 8.24442
Scaled_Jacobian: Low = 0.0811409, Average = 0.809923, High = 0.999604
Shape: Low = 0.121294, Average = 0.906176, High = 0.999999
Shape_Size: Low = 0, Average = 0, High = 0
Distortion: Low = 1, Average = 1, High = 1
Inv Radius Ratio: Low = 0.0312404, Average = 0.889327, High = 0.999999
TetVol
head-mesh-fixed-reduced.labels.tvc.fld
Number of Tet elements checked = 1067541
Euler characteristics for this mesh indicate 0 holes in this block of elements.
(Assumes a single contiguous block of elements.)
Element counts: Tets: 1067541 Faces: 2148701 Edges: 1260802 Nodes: 179643
Aspect Ratio: Low = 1.00064, Average = 1.85343, High = 74.9528
Aspect Ratio (gamma): Low = 1.00087, Average = 2.05658, High = 145.493
Volume: Low = 2.18251e-05, Average = 5.87778, High = 242.399
Condition: Low = 1.00058, Average = 1.68179, High = 27.3222
Jacobian: Low = 0.000130951, Average = 35.2667, High = 1454.4
Scaled_Jacobian: Low = 0.00244018, Average = 0.404027, High = 0.989514
Shape: Low = 0.0361498, Average = 0.669036, High = 0.999418
Shape_Size: Low = 0, Average = 0, High = 0
Distortion: Low = 1, Average = 1, High = 1
Radius Ratio: Low = 0.0133417, Average = 0.608034, High = 0.999358
Matt Jolley
10y torso
High Resolution
./mattjolley/10y-torso/junctions/points-sf2/air.ts.fld ./mattjolley/10y-torso/junctions/points-sf2/bone.ts.fld ./mattjolley/10y-torso/junctions/points-sf2/heart.ts.fld ./mattjolley/10y-torso/junctions/points-sf2/lung.ts.fld ./mattjolley/10y-torso/junctions/points-sf2/surf.ts.fld ./mattjolley/10y-torso/junctions/points-sf2/torso.ts.fld
Medium Resolution
./mattjolley/10y-torso/junctions/points-sf3/air.ts.fld ./mattjolley/10y-torso/junctions/points-sf3/bone.ts.fld ./mattjolley/10y-torso/junctions/points-sf3/heart.ts.fld ./mattjolley/10y-torso/junctions/points-sf3/lung.ts.fld ./mattjolley/10y-torso/junctions/points-sf3/surf-0.ts.fld ./mattjolley/10y-torso/junctions/points-sf3/surf.ts.fld ./mattjolley/10y-torso/junctions/points-sf3/torso.ts.fld
Low Resolution
./mattjolley/10y-torso/junctions/points-sf4/surf.ts.fld ./mattjolley/10y-torso/junctions/points-sf4/blah.ts.fld
29y torso
./mattjolley/29y-torso/junctions/points-sf3/air.ts.fld ./mattjolley/29y-torso/junctions/points-sf3/bone.ts.fld ./mattjolley/29y-torso/junctions/points-sf3/heart.ts.fld ./mattjolley/29y-torso/junctions/points-sf3/lung.ts.fld ./mattjolley/29y-torso/junctions/points-sf3/surf.ts.fld ./mattjolley/29y-torso/junctions/points-sf3/torso.ts.fld
2y torso
./mattjolley/2y-torso/junctions/points-sf3/air.ts.fld ./mattjolley/2y-torso/junctions/points-sf3/bone.ts.fld ./mattjolley/2y-torso/junctions/points-sf3/heart.ts.fld ./mattjolley/2y-torso/junctions/points-sf3/lung.ts.fld ./mattjolley/2y-torso/junctions/points-sf3/surf.ts.fld ./mattjolley/2y-torso/junctions/points-sf3/torso.ts.fld
./mattjolley/10y-torso-sf2-labels.tvc.fld
./mattjolley/10y-torso-sf4-labels.tvc.fld
40y torso
./mattjolley/40y-torso/torso/junctions/points-sf3/40y-torso-sf3-labels.tvc.fld
./mattjolley/40y-torso/torso/junctions/points-sf3/air.ts.fld ./mattjolley/40y-torso/torso/junctions/points-sf3/blood.ts.fld ./mattjolley/40y-torso/torso/junctions/points-sf3/bone.ts.fld ./mattjolley/40y-torso/torso/junctions/points-sf3/heart.ts.fld ./mattjolley/40y-torso/torso/junctions/points-sf3/lung.ts.fld ./mattjolley/40y-torso/torso/junctions/points-sf3/surf.ts.fld ./mattjolley/40y-torso/torso/junctions/points-sf3/tets.tv.fld ./mattjolley/40y-torso/torso/junctions/points-sf3/torso.ts.fld
./mattjolley/10y-torso-cut-heart-bone.png
./mattjolley/10y-torso-cut-lung-bone.png
./mattjolley/10y-torso-edges.png
./mattjolley/10y-torso-sf2-cut-heart-bone.png
./mattjolley/10y-torso-sf2-cut-lung-bone.png
./mattjolley/10y-torso-sf2-edges.png
./mattjolley/10y-torso-sf2-surfs-cut.png
./mattjolley/10y-torso-sf2-surfs-cut2.png
./mattjolley/10y-torso-sf2-surfs-cut3.png
./mattjolley/10y-torso-sf2-surfs.png
./mattjolley/29y-torso-edges.png
./mattjolley/2y-torso-sf3-edges.png
./mattjolley/40y-torso/40y-torso-surfs-edges-clipped.png
./mattjolley/40y-torso/40y-torso-surfs-edges.png
</nowiki
Fangxiang
Images
- ./clipped-labeled-tets.png
- ./clipped-labeled-tets2.png
TriSurf
Fangxiang/psys/junctions/points-sf3/
Number of Tri elements checked = 321532
Euler characteristics for this mesh indicate -9 holes in this block of elements.
(Assumes a single contiguous block of elements.)
Tris: 321532 Edges: 477196 Nodes: 155647
Area: Low = 2.82843e-07, Average = 1.70254, High = 77.8086
Minimum_Angle: Low = 0.00236079, Average = 44.969, High = 59.9776
Maximum_Angle: Low = 60.0355, Average = 78.5486, High = 174.548
Condition: Low = 1, Average = 1.85798, High = 14012.1
Scaled_Jacobian: Low = 4.75779e-05, Average = 0.808549, High = 0.999775
Shape: Low = 7.13668e-05, Average = 0.904197, High = 1
Shape_Size: Low = 0, Average = 0, High = 0
Distortion: Low = 1, Average = 1, High = 1
Inv Radius Ratio: Low = 7.58895e-05, Average = 0.887555, High = 1
- surf.ts.fld
- ventricle.ts.fld
- tets.tv.fld
- csf.ts.fld
- skull.ts.fld
- air.ts.fld
- scalp.ts.fld
- white.ts.fld
- grey.ts.fld
TetVol
Fangxiang/psys/junctions/points-sf3/
brain-labels.tvc.fld
Number of Tet elements checked = 1190125
Euler characteristics for this mesh indicate 20 holes in this block of elements.
(Assumes a single contiguous block of elements.)
Element counts: Tets: 1190125 Faces: 2411973 Edges: 1429334 Nodes: 207448
Aspect Ratio: Low = 1.00006, Average = 2.34331, High = 19518.4
Aspect Ratio (gamma): Low = 1.00008, Average = 16.6877, High = 3.91792e+06
Volume: Low = 1e-10, Average = 2.74514, High = 265.35
Condition: Low = 1.00005, Average = 2.26923, High = 23606.9
Jacobian: Low = 6e-10, Average = 16.4708, High = 1592.1
Scaled_Jacobian: Low = 9.02408e-08, Average = 0.413604, High = 0.997311
Shape: Low = 4.02374e-05, Average = 0.6764, High = 0.999947
Shape_Size: Low = 0, Average = 0, High = 0
Distortion: Low = 1, Average = 1, High = 1
Radius Ratio: Low = 5.12337e-05, Average = 0.621546, High = 0.999938
